congene(1)
NAME
congene - console version of UGENE(1)
SYNOPSIS
congene [OPTIONS] [--scheme SCHEME [SHEME2...]] [--suite SUITE [SUITE2...]]
DESCRIPTION
congene is a console version of UGENE(1) - visual environment for DNA
and protein sequence analysis. congene allows user to launch UGENE computational workflows or test suites from the command line and analyse
the textual output.
OPTIONS
- --help Print a usage message briefly summarizing these command-line
- options and the program version, then exit.
- --suite SUITE
- Load and run UGENE test suite or test list.
- --scheme SCHEME
- Load and run workflow designer scheme.
- --test-timeout=<number>
- Set time out for tests.
- --test-num-threads=<number>
- Set number of threads for tests.
- --teamcity-out
- Output test's messages for TeamCity system.
- --log-no-show-date
- Don`t show date&time info at log.
- --log-no-show-level
- Don`t show message level at log.
- --log-no-show-category
- Don`t show message category at log.
- --log-level-none
- Don`t show log messages.
- --log-level-error
- Show only error log messages.
- --log-level-info
- Show error and info log messages (default).
- --log-level-details
- Show detailed information messages.
- --log-level-trace
- Show trace messages.
- --no-task-status-bar
- Don`t show task status bar.
- --color-output
- Colored output.
- --load-settings-file=<filename>
- Load custom UGENE settings file.
SEE ALSO
BUGS
If you find a bug, please report it at ugene@unipro.ru.
AUTHOR
- congene was created by Unipro (http://unipro.ru)