LIBSCANOUT(1e)
NAME
libscanout - Reads a DHF file and writes a file of top-scoring Classes,
Folds and Superfamilies.
SYNOPSIS
libscanout -dhfinfile infile -outfile outfile libscanout -help
DESCRIPTION
libscanout is a command line program from EMBOSS ("the European
Molecular Biology Open Software Suite"). It is part of the "Protein:3D
Structure" command group(s).
OPTIONS
- Input section
- -dhfinfile infile
This option specifies the location of the DHF file (domain hits
file) (input). A 'domain hits file' contains database hits
(sequences) with domain classification information, in FASTA or
EMBL formats. The hits are relatives to a SCOP or CATH family and
are found from a search of a sequence database. Files containing
hits retrieved by PSIBLAST are generated by using SEQSEARCH. - Required section
Output section - -outfile outfile
This option specifies the location of the summary file (output).
The summary file contains lists of domain Classes, Superfamilies
and Families rank-ordered on the basis of score (highest-scoring
first).
BUGS
Bugs can be reported to the Debian Bug Tracking system
(http://bugs.debian.org/emboss), or directly to the EMBOSS developers
(http://sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO
libscanout is fully documented via the tfm(1) system.
AUTHOR
- Debian Med Packaging Team
<debian-med-packaging@lists.alioth.debian.org> - Wrote the script used to autogenerate this manual page.
COPYRIGHT
- This manual page was autogenerated from an Ajax Control Definition of
the EMBOSS package. It can be redistributed under the same terms as
EMBOSS itself.