sc::sumintcoor(3)

NAME

sc::SumIntCoor - SumIntCoor is used to construct linear combinations of internal coordinates.

SYNOPSIS

#include <coor.h>
Inherits sc::IntCoor.
Public Member Functions
SumIntCoor (StateIn &)
SumIntCoor (const char *)
    This constructor takes a string containing a label for this
    coordinate.
SumIntCoor (const Ref< KeyVal > &)
    The KeyVal constructor.
void save_data_state (StateOut &)
    Save the base classes (with save_data_state) and the members in the
    same order that the StateIn CTOR initializes them.
int n ()
    Returns the number of coordinates in this linear combination.
void add (Ref< IntCoor > &, double coef)
    Add a coordinate to the linear combination.
void normalize ()
    This function normalizes all the coefficients.
double preferred_value () const
    Returns the value of the coordinate in a.u. and radians.
const char * ctype () const
    Always returns ``SUM''.
void print_details (const Ref< Molecule > &, std::ostream
    &=ExEnv::out0()) const
    Print the individual coordinates in the sum with their
    coefficients.
double force_constant (Ref< Molecule > &)
    Returns the weighted sum of the individual force constants.
void update_value (const Ref< Molecule > &)
    Recalculate the value of the coordinate.
void bmat (const Ref< Molecule > &, RefSCVector &bmat, double coef=1.0)
    Fill in a row the the B matrix.
int equivalent (Ref< IntCoor > &)
    Always returns 0.

Detailed Description

SumIntCoor is used to construct linear combinations of internal coordinates.

The following is a sample ParsedKeyVal input for a SumIntCoor object:
sumintcoor<SumIntCoor>: (
coor: [
<StreSimpleCo>:( atoms = [ 1 2 ] )
<StreSimpleCo>:( atoms = [ 2 3 ] )
]
coef = [ 1.0 1.0 ]
)

Constructor & Destructor Documentation

sc::SumIntCoor::SumIntCoor (const char *)
This constructor takes a string containing a label for this coordinate.
sc::SumIntCoor::SumIntCoor (const Ref< KeyVal > &)
The KeyVal constructor.
coor
A vector of IntCoor objects that define the summed coordinates.
coef
A vector of floating point numbers that gives the coefficients of
the summed coordinates.

Member Function Documentation

void sc::SumIntCoor::save_data_state (StateOut &) [virtual]
Save the base classes (with save_data_state) and the members in the
same order that the StateIn CTOR initializes them.
This must be implemented by the derived class if the class has data.
Reimplemented from sc::IntCoor.
void sc::SumIntCoor::add (Ref< IntCoor > &, double coef)
Add a coordinate to the linear combination.
coef is the coefficient for the added coordinate.

Author

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