TFBS::Word(3pm)
NAME
TFBS::Word - base class for word-based patterns
DESCRIPTION
TFBS::Word is a base class consisting of universal constructor called
by its subclasses (TFBS::Matrix::*), and word pattern manipulation
methods that are independent of the word type. It is not meant to be
instantiated itself.
FEEDBACK
Please send bug reports and other comments to the author.
AUTHOR - Boris Lenhard
Boris Lenhard <Boris.Lenhard@cgb.ki.se>
APPENDIX
- The rest of the documentation details each of the object methods.
Internal methods are preceded with an underscore. - new
word
validate_word - Required in all subclasses
- length
search_seq
search_aln