CLUSTERIMAGESTATISTICS(1)
NAME
ClusterImageStatistics - part of ANTS registration suite
DESCRIPTION
- Given an ROI and Label Image, find the max and average value in
a value image where the value > some user-defined threshold and
the cluster size is larger than some min size.
- Usage:
- ./ClusterImageStatistics ImageDimension ROIMask.ext LabelImage.ext OutPrefix MinimumClusterSize ValueImageThreshold Image1WithValuesOfInterest.ext ... ImageNWithValuesOfInterest.ext
ROIMask.ext -- overall region of interest- LabelImage.ext -- labels for the sub-regions, e.g. Brodmann or just unique labels (see
- LabelClustersUniquely )
- OutputPrefix -- all output
- has this prefix
- MinimumClusterSize -- the minimum size of clusters of interest
- ValueImageThreshold -- minimum value of interest
- Image*WithValuesOfInterest.ext
- --- image(s) that define the values you want to measure