dsrdump(1)

NAME

dsrdump - Dump DICOM SR file and data set

SYNOPSIS

dsrdump [options] dsrfile-in...

DESCRIPTION

The dsrdump utility dumps the contents of a DICOM Structured Reporting (SR) document (file format or raw data set) to stdout in textual form. The output of the document content follows the format proposed in David Clunie's book 'DICOM Structured Reporting' (PixelMed Publishing, 2000).

If dsrdump reads a raw data set (DICOM data without a file format metaheader) it will attempt to guess the transfer syntax by examining the first few bytes of the file. It is not always possible to correctly guess the transfer syntax and it is better to convert a data set to a file format whenever possible (using the dcmconv utility). It is also possible to use the -f and -t[ieb] options to force dsrdump to read a dataset with a particular transfer syntax.

PARAMETERS

dsrfile-in DICOM SR input filename to be dumped

OPTIONS

general options: -h --help
print this help text and exit; --version
print version information and exit; -d --debug
debug mode, print debug information; -dd --verbose-debug
verbose debug mode, print more details
input options: input file format:

+f --read-file
read file format or data set (default)

+fo --read-file-only

read file format only

-f --read-dataset

read data set without file meta information
input transfer syntax:: -t= --read-xfer-auto
use TS recognition (default); -td --read-xfer-detect
ignore TS specified in the file meta header; -te --read-xfer-little
read with explicit VR little endian TS; -tb --read-xfer-big
read with explicit VR big endian TS; -ti --read-xfer-implicit
read with implicit VR little endian TS
parsing options: additional information:

-Ip --processing-details
show currently processed content item
error handling:: -Ec --ignore-constraints
ignore relationship content constraints; -Ee --ignore-item-errors
do not abort on content item errors, just warn
(e.g. missing value type specific attributes); -Ei --skip-invalid-items
skip invalid content items (incl. sub-tree)
output options: printing:

+Pf --print-filename
print header with filename for each document

-Ph --no-document-header

do not print general document information

+Pn --number-nested-items

print position string in front of each line

-Pn --indent-nested-items

indent nested items by spaces (default)

+Pl --print-long-values

print long item values completely

-Pl --shorten-long-values

print long item values shortened (default)

+Pu --print-instance-uid

print SOP instance UID of referenced objects

+Pc --print-all-codes

print all codes (incl. concept name codes)

+Pt --print-template-id

print template identification information

NOTES

DICOM Conformance: The dsrdump utility supports the following SOP Classes (according to DICOM 2004 and Supplement 94):; BasicTextSR 1.2.840.10008.5.1.4.1.1.88.11
EnhancedSR 1.2.840.10008.5.1.4.1.1.88.22
ComprehensiveSR 1.2.840.10008.5.1.4.1.1.88.33
ProcedureLog 1.2.840.10008.5.1.4.1.1.88.40
MammographyCADSR 1.2.840.10008.5.1.4.1.1.88.50
KeyObjectSelectionDocument 1.2.840.10008.5.1.4.1.1.88.59
ChestCADSR 1.2.840.10008.5.1.4.1.1.88.65
XRayRadiationDoseSR 1.2.840.10008.5.1.4.1.1.88.67

COMMAND LINE

All command line tools use the following notation for parameters: square brackets enclose optional values (0-1), three trailing dots indicate that multiple values are allowed (1-n), a combination of both means 0 to n values.

Command line options are distinguished from parameters by a leading '+' or '-' sign, respectively. Usually, order and position of command line options are arbitrary (i.e. they can appear anywhere). However, if options are mutually exclusive the rightmost appearance is used. This behaviour conforms to the standard evaluation rules of common Unix shells.

In addition, one or more command files can be specified using an '@' sign as a prefix to the filename (e.g. @command.txt). Such a command argument is replaced by the content of the corresponding text file (multiple whitespaces are treated as a single separator) prior to any further evaluation. Please note that a command file cannot contain another command file. This simple but effective approach allows to summarize common combinations of options/parameters and avoids longish and confusing command lines (an example is provided in file share/data/dumppat.txt).

ENVIRONMENT

The dsrdump utility will attempt to load DICOM data dictionaries specified in the DCMDICTPATH environment variable. By default, i.e. if the DCMDICTPATH environment variable is not set, the file <PREFIX>/lib/dicom.dic will be loaded unless the dictionary is built into the application (default for Windows).

The default behaviour should be preferred and the DCMDICTPATH environment variable only used when alternative data dictionaries are required. The DCMDICTPATH environment variable has the same format as the Unix shell PATH variable in that a colon (':') separates entries. The data dictionary code will attempt to load each file specified in the DCMDICTPATH environment variable. It is an error if no data dictionary can be loaded.

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