NPS2GPS(1)
NAME
nps2gps - convert nucleotide-protein sets to ASN.1 genomic product sets
SYNOPSIS
nps2gps [-] [-D] [-F] [-L] [-P] [-R] [-f str] [-i filename] [-o file- name] [-p path] [-r path] [-x str]
DESCRIPTION
nps2gps converts NCBI Bioseq-sets from simple nucleotide-protein sets
to full genomic product sets complete with mRNA transcripts, which it
outputs as text ASN.1.
OPTIONS
A summary of options is included below.
- Print usage message
-D RefSeq mRNA Titles
-F Map by Feature ID
-L Lock components in advance
-P mRNA ID from Protein
-R Enable Remote fetching from ID
-f str Substring filter
- -i filename
- Single input file (default = stdin)
- -o filename
- Single output file (default = stdout)
- -p path
- Path to files for batch conversion
- -r path
- Path for results of batch conversion
- -x str File selection suffix for batch conversion (default = .ent)
AUTHOR
The National Center for Biotechnology Information.